CLINICAL METAGENOMICS PLATFORM FOR HOSPITAL INFECTION CONTROL

Detect outbreaks before they happen

Early outbreak detection with comprehensive pathogen tracking and AMR surveillance

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PROMETHION SEQUENCING
COMPREHENSIVE AMR DATABASE
BACTERIA • VIRUSES • FUNGI
Early
OUTBREAK DETECTION
Detect emerging threats weeks before clinical symptoms appear through continuous monitoring
Comprehensive
PATHOGEN MONITORING
Complete database tracking bacteria, viruses, and fungi including ESKAPE+ pathogens
Complete
AMR GENE TRACKING
Resistance gene profiling across all major antibiotic classes with continuous database updates

Advanced Pathogen Intelligence Center

Interactive demo - Select hospital sections and customize tracking parameters

Hospital Sections

ICU
CRITICAL ALERT
Main ICU
Isolation Room 1
Isolation Room 2
Ward 3E
ELEVATED
General Ward
Private Rooms
Surgical Ward
NORMAL
Recovery
Pre-Op
Emergency Dept
NORMAL
Main ED
Trauma Bay
Oncology
ELEVATED
Main Ward
Infusion Center

ICU - Real-Time Surveillance

Continuous pathogen monitoring with automated statistical anomaly detection

CRITICAL ALERT: K. pneumoniae Outbreak
CRITICAL
Detection confidence: 99.2% | Coverage: 98.7% | Statistical significance: p<0.001 vs. 30-day baseline
Pathogen Load Trends
Selected pathogens over time
AMR Gene Trends
Selected resistance genes
Time Series Analysis
Week 1 - Week 6
Week 1
Week 2
Week 3
Week 4
Week 5
Week 6
Track Pathogens & AMR Genes:
K. pneumoniae
A. baumannii
E. faecium
S. aureus
blaNDM-1
blaKPC-3
vanA
mecA

Pathogen Analytics

Comprehensive pathogen detection and trend analysis

ESKAPE Pathogens
6-week surveillance
Enterococcal Species
VRE tracking
Gram-Negative Rods
Enteric pathogens
Staphylococcal Species
s
MRSA & MSSA
Pathogen Time Series
Week 1 - Week 6
Week 1
Week 2
Week 3
Week 4
Week 5
Week 6
Select Pathogens to Track:
K. pneumoniae
A. baumannii
E. faecium
S. aureus
P. aeruginosa
E. coli
C. albicans
C. auris

AMR Gene Tracking

Comprehensive resistance gene profiling

Carbapenemase Genes
NDM, KPC, OXA variants
ESBL Genes
CTX-M, SHV, TEM variants
Glycopeptide Resistance
vanA/vanB variants
Methicillin Resistance
mecA/mecC variants
AMR Gene Time Series
Week 1 - Week 6
Week 1
Week 2
Week 3
Week 4
Week 5
Week 6
Select AMR Genes to Track:
blaNDM-1
blaKPC-3
vanA
vanB
mecA
blaOXA-48
blaCTX-M-15
mcr-1

Platform Capabilities

Enterprise-grade clinical metagenomics analysis with comprehensive quality control

Real-Time Alert System
Automated notifications via SMS, email, webhook, FHIR integration. Customizable thresholds per pathogen/gene. Multi-tier alert escalation (info, warning, critical). Direct integration with infection prevention and control (IPC) team workflows.
Statistical Anomaly Detection
Advanced detection with customizable alert thresholds with seasonality correction and automated outbreak probability scoring with confidence intervals.
Ward-Level Spatial Resolution
Zone-specific pathogen tracking across ICU, surgical, medical, oncology, and emergency departments.
Regulatory Compliance
Compliant data handling with encrypted storage (AES-256) and transmission (TLS 1.3). Full audit logs for regulatory inspection.

Deploy Wastewater Surveillance at Your Hospital

We handle the entire workflow: sample collection (on-site or hospital-provided), PromethION long-read sequencing, automated bioinformatics analysis, and actionable outbreak alerts delivered to your infection control team

Schedule Demo Contact Sales

Flexible sample collection options | PromethION sequencing | Automated analysis | Real-time alerts | Training & ongoing support included